Bioinformatics and Functional Genomics, 2nd Edition

Chapter 12: Functional Genomics

In Chapter 12 we describe the field of functional genomics, including genome-wide and high throughput approaches to gene and protein function.

Model organism
Page
Key web resources
Escherichia coli
466
EcoCyc, Regulon, EcoGene, MetaCyc
Saccharomyces cerevisiae
466
SGD
Arabidopsis thaliana
470
TAIR
Caenorhabditis elegans
470
Wormbase, trans-NIH C. elegans intiative
Drosophila melanogaster
471
FlyBase
Danio rerio
471
VEGA, Zfin, trans-NIH zebrafish initiative
Mus musculus
472
MGD, trans-NIH mouse initiative
Homo sapiens
473
NCBI human genome resources, Ensembl, UCSC


Chapter 12 Resources
A powerpoint for the functional genomics chapter is not available. Please contact me if you would like images to use for teaching.
Moodle site. This teaching site includes quizzes and readings; non-registered students can enter as guests
Key URLs: NCBI BLAST page; UCSC; Pfam database