- 3rd Edition home
- Resources for Teachers
- The book's webpage at Wiley
- Part I : Bioinformatics : Analyzing DNA, RNA, and Protein Sequences
- Part II: Functional Genomics: Bioinformatics from DNA to RNA to Protein
- Chapter 8: The Eukaryotic Chromosome
- Chapter 9: DNA Analysis: Microarrays and Next Generation Sequencing
- Chapter 10: Bioinformatic Approaches to RNA
- Chapter 11: RNA Analysis: Microarrays and Next Generation Sequencing
- Chapter 12: Proteomics
- Chapter 13: Protein Structure
- Chapter 14: Functional Genomics
- Part III: Genomics
- Second edition
Bioinformatics and Functional Genomics 3rd Edition
Chapter 14: Functional Genomics
In Chapter 14 we describe the field of functional genomics, including genome-wide and high throughput approaches to gene and protein function.
| Model organism |
Page
|
Key web resources |
| Escherichia coli |
466
|
EcoCyc, Regulon, EcoGene, MetaCyc |
| Saccharomyces cerevisiae |
466
|
SGD |
| Arabidopsis thaliana |
470
|
TAIR |
| Caenorhabditis elegans |
470
|
Wormbase, trans-NIH C. elegans intiative |
| Drosophila melanogaster |
471
|
FlyBase |
| Danio rerio |
471
|
VEGA, Zfin, trans-NIH zebrafish initiative |
| Mus musculus |
472
|
MGD, trans-NIH mouse initiative |
| Homo sapiens |
473
|
NCBI human genome resources, Ensembl, UCSC |
|
Chapter 12 Resources
|
| A powerpoint for the functional genomics chapter is not available. Please contact me if you would like images to use for teaching. |
| Moodle site. This teaching site includes quizzes and readings; non-registered students can enter as guests |
| Key URLs: NCBI BLAST page; UCSC; Pfam database |