Web document 10.1. 15 most common families and repeats. From the InterPro database (http://www.ebi.ac.uk/interpro/).  

 

Accessed January 29, 2010 from Integr8 at EBI

 

 

 

15 most common families for H.sapiens

 

InterPro

Proteins matched

Name

1

IPR000276

848

GPCR, rhodopsin-like

2

IPR017452

842

GPCR, rhodopsin-like superfamily

3

IPR000725

532

Olfactory receptor

4

IPR001806

169

Ras GTPase

5

IPR013753

127

Ras

6

IPR007114

105

Major facilitator superfamily

7

IPR001664

88

Intermediate filament protein

8

IPR011701

86

Major facilitator superfamily MFS-1

9

IPR001128

76

Cytochrome P450

10

IPR000832

69

GPCR, family 2, secretin-like

11

IPR002494

64

Keratin, high sulphur B2 protein

12

IPR002198

64

Short-chain dehydrogenase/reductase SDR

13

IPR003579

63

Ras small GTPase, Rab type

14

IPR004000

59

Actin/actin-like

15

IPR001993

59

Mitochondrial substrate carrier

 

 

 

15 most common repeats for H.sapiens

 

InterPro

Proteins matched

Name

1

IPR001680

301

WD40 repeat

2

IPR002110

280

Ankyrin

3

IPR001611

271

Leucine-rich repeat

4

IPR003591

130

Leucine-rich repeat, typical subtype

5

IPR001440

110

Tetratricopeptide TPR-1

6

IPR008160

85

Collagen triple helix repeat

7

IPR000357

77

HEAT

8

IPR013105

72

Tetratricopeptide TPR2

9

IPR006652

71

Kelch repeat type 1

10

IPR000884

65

Thrombospondin, type I

11

IPR008161

58

Collagen helix repeat

12

IPR002172

51

Low density lipoprotein-receptor, class A, cysteine-rich

13

IPR000225

48

Armadillo

14

IPR003659

46

Plexin/semaphorin/integrin

15

IPR002017

34

Spectrin repeat